MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7394-P1

Family name MIR-7394 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7394-P2  Neu-Mir-7394-P3 
Orthologues Mdo-Mir-7394-P1  Sha-Mir-7394-P1 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 62663877-62663930 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7394-P1)
Mir-7392 CM051820.1: 62654357-62654413 [+] UCSC Ensembl
Mir-7394-P1 CM051820.1: 62663877-62663930 [+] UCSC Ensembl
Mir-7394-P2 CM051820.1: 62671261-62671314 [+] UCSC Ensembl
Mir-7397 CM051820.1: 62674945-62675000 [+] UCSC Ensembl
Mir-7394-P3 CM051820.1: 62677964-62678017 [+] UCSC Ensembl
Seed AUGUGUG
Precursor
(pre-Mir +30nt flank)
UACCGCAUAACAGUUGUGUUGCCUCAGCUAUAUGUGUGUCCAUGUUACAUGUGUUCCAUUACAUGUAACCUAGUCACACGUAUUCCUGGAGUAUAUCCAUUCCUCCAUAUUUCC
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Structure
        10          20        30        40        50      
UACCGCAUAACAGUUGUGU--|  CU   CU         UCCAU         GUU 
                     UGC  CAG  AUAUGUGUG     GUUACAUGU   C
                     AUG  GUC  UAUGCACAC     CAAUGUACA   C
CCUUUAUACCUCCUUACCUAU^  AG   CU         UGAUC         UUA 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7394-P1_5p

mirBase accessionNone
Sequence
0- UAUGUGUGUCCAUGUUACAUGU -22
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Star sequence

Neu-Mir-7394-P1_3p*

mirBase accessionNone
Sequence
32- AUGUAACCUAGUCACACGUAUU -54
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