MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7392

Family name MIR-7392 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Mdo-Mir-7392-P1a  Mdo-Mir-7392-P1b  Sha-Mir-7392-P2  Sha-Mir-7392-P3 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 62654357-62654413 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7392)
Mir-7392 CM051820.1: 62654357-62654413 [+] UCSC Ensembl
Mir-7394-P1 CM051820.1: 62663877-62663930 [+] UCSC Ensembl
Mir-7394-P2 CM051820.1: 62671261-62671314 [+] UCSC Ensembl
Mir-7397 CM051820.1: 62674945-62675000 [+] UCSC Ensembl
Mir-7394-P3 CM051820.1: 62677964-62678017 [+] UCSC Ensembl
Seed ACGAGUA
Precursor
(pre-Mir +30nt flank)
CCUGAAGUAUCAAAAGUGAGUUGCCCCAGGUACGAGUAUACUUUGGUUACCUGAGUGUACAUGUCAGUAACCUCAGUAUACUUGCUCCUGGUGUACACUUCUCUGUACACAUUCAAC
Get precursor sequence
Structure
        10        20         30        40        50         
CCUGAAGUAUCAAAAGUG   -|  C     UA          UU      C   GUGU 
                  AGU UGC CCAGG  CGAGUAUACU  GGUUAC UGA    \
                  UCA AUG GGUCC  GUUCAUAUGA  CCAAUG ACU    A
CAACUUACACAUGUCUCU   C^  U     UC          CU      -   GUAC 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7392_5p

mirBase accessionNone
Sequence
0- UACGAGUAUACUUUGGUUACCUGA -24
Get sequence
Star sequence

Neu-Mir-7392_3p*

mirBase accessionNone
Sequence
35- AGUAACCUCAGUAUACUUGCUC -57
Get sequence