| MirGeneDB ID | Mun-Mir-430-o43 |
|---|
| Family name |
MIR-430 (all species) |
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| Seed |
AAGUGCU |
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| Species |
Microcaecilia (Microcaecilia unicolor) |
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| MiRBase ID |
|
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| Paralogues |
Mun-Mir-430-o42
Mun-Mir-430-P1
|
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| Orthologues |
Hsa-Mir-430-P43
Mml-Mir-430-P43
|
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| Node of Origin (locus) |
M. unicolor
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(Mun_miRNA_loci) |
430-o43_LR594633.1:436877910-436878173: 101-164 [+]
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAAUCCUCCUGGUGUAAAUGGACCCCUUCUGCUUUAACAUGAAAGCACUUUCUGUAUGCACUGAGAGUUGGUAAGUGCUUCCAUGUUAAAGUACAGGUGAAUCCUACUUUCUCAGUCAUAUCUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAAUCCUCCUGGUGUAAAU- CC--| UC A U GUAUGCA
GGA CCU UGCUUUAACAUG AAGCACUU CU C
CCU GGA AUGAAAUUGUAC UUCGUGAA GG U
UUCUAUACUGACUCUUUCAU AAGU^ C- C U UUGAGAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Mun-Mir-430-o43_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GCUUUAACAUGAAAGCACUUUCU -23
Get sequence
|
|---|
| Mature sequence |
Mun-Mir-430-o43_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
41- UAAGUGCUUCCAUGUUAAAGUAC -64
Get sequence
|
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