MirGeneDB ID | Mun-Mir-430-o42 |
Family name |
MIR-430 (all species) |
Seed |
AAGUGCU |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
Mun-Mir-430-o43
Mun-Mir-430-P1
|
Orthologues |
Hsa-Mir-430-P42
Mml-Mir-430-P42
|
Node of Origin (locus) |
M. unicolor
|
Node of Origin (family) |
Vertebrata
|
Genome context (Mun_miRNA_loci) |
430-o42_LR594633.1:436877343-436877598: 101-156 [+]
|
Precursor (pre-Mir +30nt flank) |
CAGACGGCUGCAUUGUGGAACCUUUGCUUCUUUAACAUGGAGGUACUUUCUGUAUCUAUACGCAAUAAGUGCUUCCCUGUUCUAGGAGCAGGGAAAUCCUGAACCUCAGGUCAUGU
Get precursor sequence
|
Structure | 10 20 30 40 50
CAGACGGCUGCAUUGUGGAAC--| UU U UCUGUAUC
CUUUGCUUCU AACA GGAGGUACUU U
GGGACGAGGA UUGU CCUUCGUGAA A
UGUACUGGACUCCAAGUCCUAAA^ UC C UAACGCAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mun-Mir-430-o42_5p* |
mirBase accession | None |
Sequence |
0- UUUAACAUGGAGGUACUUUCU -21
Get sequence
|
Mature sequence |
Mun-Mir-430-o42_3p |
mirBase accession | None |
Sequence |
35- UAAGUGCUUCCCUGUUCUAGG -56
Get sequence
|