MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-154-P10

Family name MIR-154 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-1193
Paralogues Mmu-Mir-154-P1  Mmu-Mir-154-P2-v1  Mmu-Mir-154-P3-v1  Mmu-Mir-154-P4  Mmu-Mir-154-P5  Mmu-Mir-154-P6a-v1  Mmu-Mir-154-P7  Mmu-Mir-154-P8-o1  Mmu-Mir-154-P9  Mmu-Mir-154-P10-v1  Mmu-Mir-154-P11  Mmu-Mir-154-P12  Mmu-Mir-154-P15  Mmu-Mir-154-P17  Mmu-Mir-154-P18  Mmu-Mir-154-P19  Mmu-Mir-154-P24  Mmu-Mir-154-P25  Mmu-Mir-154-P26  Mmu-Mir-154-P28-v1  Mmu-Mir-154-P29  Mmu-Mir-154-P30  Mmu-Mir-154-P31  Mmu-Mir-154-P32  Mmu-Mir-154-P33 
Orthologues Bta-Mir-154-P10  Cfa-Mir-154-P10  Cja-Mir-154-P10  Cpo-Mir-154-P10  Dno-Mir-154-P10  Eca-Mir-154-P10  Ete-Mir-154-P10  Hsa-Mir-154-P10  Laf-Mir-154-P10  Mml-Mir-154-P10  Mmr-Mir-154-P10  Pab-Mir-154-P10  Rno-Mir-154-P10 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr12: 109715716-109715770 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P10-v2)		 Mir-154-P1 chr12: 109709065-109709122 [+] UCSC Ensembl
Mir-154-P2-v2 chr12: 109710189-109710246 [+] UCSC Ensembl
Mir-154-P2-v1 chr12: 109710190-109710245 [+] UCSC Ensembl
Mir-154-P3-v1 chr12: 109710643-109710697 [+] UCSC Ensembl
Mir-154-P3-v2 chr12: 109710644-109710696 [+] UCSC Ensembl
Mir-154-P4 chr12: 109711806-109711862 [+] UCSC Ensembl
Mir-154-P5 chr12: 109712361-109712416 [+] UCSC Ensembl
Mir-154-P6a-v1 chr12: 109712523-109712578 [+] UCSC Ensembl
Mir-154-P6a-v2 chr12: 109712523-109712578 [+] UCSC Ensembl
Mir-154-P7 chr12: 109712823-109712880 [+] UCSC Ensembl
Mir-154-P8-o1 chr12: 109713503-109713562 [+] UCSC Ensembl
Mir-154-P9 chr12: 109715334-109715389 [+] UCSC Ensembl
Mir-154-P10-v1 chr12: 109715715-109715771 [+] UCSC Ensembl
Mir-154-P10-v2 chr12: 109715716-109715770 [+] UCSC Ensembl
Mir-666 chr12: 109717103-109717163 [+] UCSC Ensembl
Mir-154-P11 chr12: 109717268-109717325 [+] UCSC Ensembl
Mir-154-P12 chr12: 109718757-109718816 [+] UCSC Ensembl
Mir-667 chr12: 109720020-109720083 [+] UCSC Ensembl
Mir-376-P2 chr12: 109722733-109722790 [+] UCSC Ensembl
Mir-376-P4 chr12: 109723471-109723528 [+] UCSC Ensembl
Mir-376-P5 chr12: 109723787-109723844 [+] UCSC Ensembl
Mir-154-P15 chr12: 109724322-109724384 [+] UCSC Ensembl
Mir-154-P17 chr12: 109726829-109726891 [+] UCSC Ensembl
Mir-154-P18 chr12: 109727346-109727403 [+] UCSC Ensembl
Mir-154-P19 chr12: 109728136-109728197 [+] UCSC Ensembl
Mir-544 chr12: 109729335-109729391 [+] UCSC Ensembl
Mir-154-P24 chr12: 109733781-109733838 [+] UCSC Ensembl
Mir-134 chr12: 109734145-109734205 [+] UCSC Ensembl
Mir-154-P25 chr12: 109734910-109734968 [+] UCSC Ensembl
Mir-154-P26 chr12: 109738438-109738495 [+] UCSC Ensembl
Mir-154-P28-v2 chr12: 109739132-109739187 [+] UCSC Ensembl
Mir-154-P28-v1 chr12: 109739133-109739186 [+] UCSC Ensembl
Mir-154-P29 chr12: 109740515-109740574 [+] UCSC Ensembl
Mir-541 chr12: 109742422-109742487 [+] UCSC Ensembl
Mir-154-P30 chr12: 109743172-109743225 [+] UCSC Ensembl
Mir-154-P31 chr12: 109743303-109743358 [+] UCSC Ensembl
Mir-154-P32 chr12: 109743431-109743486 [+] UCSC Ensembl
Mir-154-P33 chr12: 109743729-109743784 [+] UCSC Ensembl
Mir-3072 chr12: 109747893-109747949 [+] UCSC Ensembl
Variant

Mmu-Mir-154-P10-v2
Seed GGUAGAC
Precursor
(pre-Mir +30nt flank)		 
UGCCCACUGUUCUCGGGGUAGCUGUGUGGAUGGUAGACCGGUGACGUACACUUCAUUUAUGCUGUAGGUCACCCGUUUUACUAUCCACCAACACCCAGACCAUCUGUGGGAAGAC
Get precursor sequence
Structure
        10        20           30         40        50      
UGCCCACUGUUCUCGGGGUAGC---| U            - C      G    CUUCA 
                         UG GUGGAUGGUAGA C GGUGAC UACA     U
                         AC CACCUAUCAUUU G CCACUG AUGU     U
CAGAAGGGUGUCUACCAGACCCACA^ -            U C      G    CGUAU 
   110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-154-P10-v2_5p
mirBase accessionMIMAT0017329
Sequence 
0- UGGUAGACCGGUGACGUACA -20
Get sequence
Proposed targets TargetScanVert: mmu-miR-1193-5p
miRDB: MIMAT0017329
Co-mature sequence

Mmu-Mir-154-P10-v2_3p
mirBase accessionMIMAT0005851
Sequence 
34- UAGGUCACCCGUUUUACUAUC -55
Get sequence
Proposed targets microrna.org: MIMAT0005851
TargetScanVert: mmu-miR-1193-3p
miRDB: MIMAT0005851
Variant

Mmu-Mir-154-P10-v1
Seed UGGUAGA
Precursor
(pre-Mir +30nt flank)		 
AUGCCCACUGUUCUCGGGGUAGCUGUGUGGAUGGUAGACCGGUGACGUACACUUCAUUUAUGCUGUAGGUCACCCGUUUUACUAUCCACCAACACCCAGACCAUCUGUGGGAAGACA
Get precursor sequence
Structure
        10            20        30         40        50       
AUGCCCACUGUUCUCGG----|  AGC  U            - C      G    CUUCA 
                     GGU   UG GUGGAUGGUAGA C GGUGAC UACA     U
                     CCA   AC CACCUAUCAUUU G CCACUG AUGU     U
ACAGAAGGGUGUCUACCAGAC^  CA-  -            U C      G    CGUAU 
     110       100         90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-154-P10-v1_5p
mirBase accessionMIMAT0017329
Sequence 
0- AUGGUAGACCGGUGACGUACA -21
Get sequence
Proposed targets TargetScanVert: mmu-miR-1193-5p
miRDB: MIMAT0017329
Co-mature sequence

Mmu-Mir-154-P10-v1_3p
mirBase accessionMIMAT0005851
Sequence 
35- UAGGUCACCCGUUUUACUAUCC -57
Get sequence
Proposed targets microrna.org: MIMAT0005851
TargetScanVert: mmu-miR-1193-3p
miRDB: MIMAT0005851