| MirGeneDB ID | Mmr-Mir-872 |
|---|
| Family name |
MIR-872 (all species) |
|---|
| Species |
Gray mouse lemur (Microcebus murinus) |
|---|
| MiRBase ID |
mmr-mir-872
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cpo-Mir-872
Eca-Mir-872
Mmu-Mir-872
Ocu-Mir-872
Rno-Mir-872
|
|---|
| Node of Origin (locus) |
Boreoeutheria
|
|---|
| Node of Origin (family) |
Boreoeutheria
|
|---|
Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007670.1: 56666147-56666207 [-]
UCSC
Ensembl
|
|---|
| Seed |
AGGUUAC |
|---|
Precursor
(pre-Mir +30nt flank) |
GGGGGUUUUUGUUAGAAGGUUACUUGUUAGAAGGUUACUUGUUAGUUCAGGACCUCAUUAUUUUUUGCCUGAACUAUAGCAGUAGCCUCUUAACUGGUGUCCCAACCUCCAGUCUUACCCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGGGUUUUUGUUAGAA-- U U GA U --| ACCUCAU
GG UACU GUUA AGGUUAC UGU UAGUUCAGG U
CC GUGG CAAU UCCGAUG ACG AUCAAGUCC A
CCCCAUUCUGACCUCCAAC U U UC - AU^ GUUUUUU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Mmr-Mir-872_5p |
| mirBase accession | MIMAT0049152 |
|---|
| Sequence |
0- AAGGUUACUUGUUAGUUCAGG -21
Get sequence
|
|---|
| Star sequence |
Mmr-Mir-872_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UGAACUAUAGCAGUAGCCUCUU -61
Get sequence
|
|---|
