| MirGeneDB ID | Mml-Mir-552 |
|---|
| Family name |
MIR-552 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-552
|
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| Paralogues |
|
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| Orthologues |
Cja-Mir-552
Hsa-Mir-552
Pab-Mir-552
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| Node of Origin (locus) |
Simiiformes
|
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| Node of Origin (family) |
Simiiformes
|
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014336.1: 189966327-189966385 [+]
UCSC
Ensembl
|
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| Seed |
GUUUGAC |
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Precursor
(pre-Mir +30nt flank) |
UUUGUUUUACCAUUCAAAUAUACCACAGUUUGUUUGACCAUUAACCUGUUUGUUGAAGAUGCCUUUCAACGGGUGACUGGUUAGACAAACUGUGGUAUAUUCACAGGAUGGAAUACUAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUGUUUUACCAUUCAA--| UUA UGUUGAAG
AUAUACCACAGUUUGUUUGACCA ACCUGUU \
UAUAUGGUGUCAAACAGAUUGGU UGGGCAA A
CAUCAUAAGGUAGGACACU^ CAG CUUUCCGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Mature sequence |
Mml-Mir-552_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUUGACCAUUAACCUGUUUG -22
Get sequence
|
|---|
| Co-mature sequence |
Mml-Mir-552_3p |
| mirBase accession | MIMAT0006421 |
|---|
| Sequence |
37- AACGGGUGACUGGUUAGACAAA -59
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-552
|
|---|
