MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7385-P5c

Family name MIR-7385 (all species)
Seed AGCACAG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7385g-3
Paralogues Mdo-Mir-7385-P1a  Mdo-Mir-7385-P1b  Mdo-Mir-7385-P1c  Mdo-Mir-7385-P2-v1  Mdo-Mir-7385-P2-v2  Mdo-Mir-7385-P3  Mdo-Mir-7385-P4  Mdo-Mir-7385-P5a  Mdo-Mir-7385-P5b  Mdo-Mir-7385-P6  Mdo-Mir-7385-P7  Mdo-Mir-7385-P8 
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
X: 4617777-4617835 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7385-P5c)
Mir-7385-P1a X: 4607962-4608023 [+] UCSC Ensembl
Mir-7385-P1b X: 4609054-4609115 [+] UCSC Ensembl
Mir-7385-P2-v1 X: 4610588-4610649 [+] UCSC Ensembl
Mir-7385-P2-v2 X: 4610588-4610649 [+] UCSC Ensembl
Mir-7385-P3 X: 4611475-4611536 [+] UCSC Ensembl
Mir-7385-P4 X: 4611934-4611995 [+] UCSC Ensembl
Mir-7385-P5a X: 4612215-4612273 [+] UCSC Ensembl
Mir-7385-P6 X: 4614575-4614633 [+] UCSC Ensembl
Mir-7385-P5b X: 4614848-4614909 [+] UCSC Ensembl
Mir-7385-P7 X: 4615421-4615479 [+] UCSC Ensembl
Mir-7385-P8 X: 4616510-4616572 [+] UCSC Ensembl
Mir-7385-P1c X: 4616788-4616846 [+] UCSC Ensembl
Mir-7385-P5c X: 4617777-4617835 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUCCUGCGUCAUCUCUAGGGUAUCUUCUUAGUCUGAUAUUCCAUGUUUCUAUGAUAUAAAACUUGGAGCACAGAAUGUCAGACCUAGAAGCUGCCUUGAACUGAUCUACACCUCCAA
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Structure
        10          20        30        40        50         
AUGUCCUGCGUCAUCUC--|      U     UA           CA      UAUGAUA 
                   UAGGGUA CUUCU  GUCUGAUAUUC  UGUUUC       \
                   GUUCCGU GAAGA  CAGACUGUAAG  ACGAGG       U
AACCUCCACAUCUAGUCAA^      C     UC           AC      UUCAAAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7385-P5c_5p*

mirBase accessionMIMAT0050380
Sequence
0- UAGUCUGAUAUUCCAUGUUUCU -22
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Mature sequence

Mdo-Mir-7385-P5c_3p

mirBase accessionMIMAT0050381
Sequence
37- GAGCACAGAAUGUCAGACCUAG -59
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