MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-723-P1a

Family name MIR-723 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-723-P1b  Mal-Mir-723-P2 
Orthologues Gmo-Mir-723-P1  Tni-Mir-723-P1 
Node of Origin (locus) M. albus
Node of Origin (family) Clupeocephala
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884756.1: 496596-496655 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-723-P1a)		 Mir-723-P1a KV884756.1: 496596-496655 [+] UCSC Ensembl
Mir-723-P1b KV884756.1: 497668-497727 [+] UCSC Ensembl
Seed GACAUCA
Precursor
(pre-Mir +30nt flank)		 
UGAUUCACGGAGUCCUAUGGCAAGGAUAACGGCAGCUUUGUGUGAUGUUACUUCUGACAUAUCGAAGAAGACAUCAGAUAAAUCUGUGCUUAUCCUUGUUAGUAUUCUCAGGCUCCAAGA
Get precursor sequence
Structure
        10          20        30        40        50        60
UGAUUCACGGAGUCCUA--|           CG    C     G      UA    UGACA 
                   UGGCAAGGAUAA  GCAG UUUGU UGAUGU  CUUC     U
                   AUUGUUCCUAUU  UGUC AAAUA ACUACA  GAAG     A
AGAACCUCGGACUCUUAUG^           CG    U     G      --    AAGCU 
.       110       100        90        80          70
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut -1 on the 5p arm.
3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-723-P1a_5p*
mirBase accessionNone
Sequence 
0- GGCAGCUUUGUGUGAUGUUACUUC -24
Get sequence
Mature sequence

Mal-Mir-723-P1a_3p
mirBase accessionNone
Sequence 
38- AGACAUCAGAUAAAUCUGUGCU -60
Get sequence