| MirGeneDB ID | Lpo-Mir-3931-P5 |
|---|
| Family name |
MIR-3931 (all species) |
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| Seed |
ACUUUGA |
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| Species |
Atlantic horseshoe crab (Limulus polyphemus) |
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| MiRBase ID |
|
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| Paralogues |
Lpo-Mir-3931-P1
Lpo-Mir-3931-P2
Lpo-Mir-3931-P3
Lpo-Mir-3931-P4
Lpo-Mir-3931-P6
Lpo-Mir-3931-P7
|
|---|
| Orthologues |
Isc-Mir-3931
|
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| Node of Origin (locus) |
L. polyphemus
|
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| Node of Origin (family) |
Chelicerata
|
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Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic) |
NW_013667763.1: 137491-137550 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AAAUGAAGCAGGAAUACAUGUUCUGGUGUUGAUUUGUACAGACUCACAGCUAAGUUAUAUUCUCAACUACUUUGAGUCGGUACGAAUCAUUACUGACAUGAAUACCAACAAAAAGAUCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAAUGAAGCAGGAAUAC----| CU U A C CUA UAUA
AUGUU GGUG UGAUUUGUAC GACUCA AG AGU U
UACAG UCAU ACUAAGCAUG CUGAGU UC UCA U
AACUAGAAAAACAACCAUAAG^ -- U G U A-- ACUC
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Lpo-Mir-3931-P5_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GAUUUGUACAGACUCACAGCUAAGU -25
Get sequence
|
|---|
| Mature sequence |
Lpo-Mir-3931-P5_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UACUUUGAGUCGGUACGAAUCAU -60
Get sequence
|
|---|
