MirGeneDB 3.0

MirGeneDB ID

Lpo-Mir-276-P7

Family name MIR-276 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-276-P3  Lpo-Mir-276-P4  Lpo-Mir-276-P5  Lpo-Mir-276-P6  Lpo-Mir-276-P8  Lpo-Mir-276-P9 
Orthologues Bge-Mir-276  Dlo-Mir-276  Dma-Mir-276  Dpu-Mir-276  Hme-Mir-276  Isc-Mir-276  Tca-Mir-276  Tur-Mir-276 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Arthropoda
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)
NW_013667514.1: 151900-151957 [-] Ensembl
Seed AGGAACU
Precursor
(pre-Mir +30nt flank)
GGAAGAAAAGACAACAGCUGGGUUCUCGGGAGCGAGGUAUGGAGUUCUUACAAGGAAUUUAAUAGGUAGGAACUUCAUACCAUGCUCGCGAUGAUUCAAAGUCCACAACACUAAGAAA
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Structure
        10          20        30        40        50        
GGAAGAAAAGACAACAGC--|     C   G     A                AAGGAA 
                    UGGGUU UCG GAGCG GGUAUGGAGUUCUUAC      U
                    ACUUAG AGC CUCGU CCAUACUUCAAGGAUG      U
AAAGAAUCACAACACCUGAA^     U   G     A                GAUAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-276-P7_5p*

mirBase accessionNone
Sequence
0- AGCGAGGUAUGGAGUUCUUACA -22
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Mature sequence

Lpo-Mir-276-P7_3p

mirBase accessionNone
Sequence
36- UAGGAACUUCAUACCAUGCUCG -58
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