| MirGeneDB ID | Lpo-Mir-276-P7 |
|---|
| Family name |
MIR-276 (all species) |
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| Seed |
AGGAACU |
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| Species |
Atlantic horseshoe crab (Limulus polyphemus) |
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| MiRBase ID |
|
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| Paralogues |
Lpo-Mir-276-P3
Lpo-Mir-276-P4
Lpo-Mir-276-P5
Lpo-Mir-276-P6
Lpo-Mir-276-P8
Lpo-Mir-276-P9
|
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| Orthologues |
Bge-Mir-276
Dma-Mir-276
Dpu-Mir-276
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
|
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| Node of Origin (locus) |
L. polyphemus
|
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| Node of Origin (family) |
Arthropoda
|
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Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic) |
NW_013667514.1: 151900-151957 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGAAGAAAAGACAACAGCUGGGUUCUCGGGAGCGAGGUAUGGAGUUCUUACAAGGAAUUUAAUAGGUAGGAACUUCAUACCAUGCUCGCGAUGAUUCAAAGUCCACAACACUAAGAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGAAGAAAAGACAACAGC--| C G A AAGGAA
UGGGUU UCG GAGCG GGUAUGGAGUUCUUAC U
ACUUAG AGC CUCGU CCAUACUUCAAGGAUG U
AAAGAAUCACAACACCUGAA^ U G A GAUAAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Lpo-Mir-276-P7_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCGAGGUAUGGAGUUCUUACA -22
Get sequence
|
|---|
| Mature sequence |
Lpo-Mir-276-P7_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UAGGAACUUCAUACCAUGCUCG -58
Get sequence
|
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