MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-384

Family name MIR-384 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-384  Eca-Mir-384  Mmr-Mir-384  Mmu-Mir-384  Ocu-Mir-384  Rno-Mir-384 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010051.1: 24687933-24687995 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-384)
Mir-325 GL010051.1: 24640232-24640291 [+] UCSC Ensembl
Mir-384 GL010051.1: 24687933-24687995 [+] UCSC Ensembl
Seed GUAAACA
Precursor
(pre-Mir +30nt flank)
ACCUUACAGGCAGAAUGUUAAAUCAGGAAUUGUAAACAAUUUCUAGGCAAUGUGUAUAAUGUUUAUAAGUCAUUCCUAGAAAUUGUUCACAAUGCCUGUAACAUAUAUGCAACUAGCAAGAUG
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Structure
        10        20          30        40        50        60 
ACCUUACAGGCAGAAUGUUAAAU--|   A     A             C    UGUAUAAU 
                         CAGG AUUGU AACAAUUUCUAGG AAUG        G
                         GUCC UAACA UUGUUAAAGAUCC UUAC        U
GUAGAACGAUCAACGUAUAUACAAU^   G     C             -    UGAAUAUU 
 120       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Wh
Mature sequence

Laf-Mir-384_5p (predicted)

mirBase accessionNone
Sequence
0- UGUAAACAAUUUCUAGGCAAUGU -23
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Star sequence

Laf-Mir-384_3p* (predicted)

mirBase accessionNone
Sequence
41- AUUCCUAGAAAUUGUUCACAAU -63
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