MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-378

Family name MIR-378 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-378  Cfa-Mir-378  Cja-Mir-378  Cpo-Mir-378  Dno-Mir-378  Eca-Mir-378  Hsa-Mir-378  Laf-Mir-378  Mml-Mir-378  Mmr-Mir-378-P1  Mmr-Mir-378-P2  Mmr-Mir-378-P3  Mmu-Mir-378  Ocu-Mir-378  Pab-Mir-378  Rno-Mir-378 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980294: 39413974-39414033 [+] UCSC
Seed CUGGACU
Precursor
(pre-Mir +30nt flank)		 
GCAGCCAGCGGGUGACAGAGCCACCCAGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUCGAAAUAGCACUGGACUUGGAGUCAGAAGGCCUGAGUGGAGUCGCCUUCCCCACUCUCCGG
Get precursor sequence
Structure
        10         20         30        40        50         
GCAGCCAGCGGGUGACA-  G-|   C    G  C              U    GUUACC 
                  GA  CCAC CAGG CU CUGACUCCAGGUCC GUGU      U
                  CU  GGUG GUCC GA GACUGAGGUUCAGG CACG      C
GGCCUCUCACCCCUUCCG  GA^   A    G  A              U    AUAAAG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-378_5p*
mirBase accessionNone
Sequence 
0- CUCCUGACUCCAGGUCCUGUGU -22
Get sequence
Mature sequence

Ete-Mir-378_3p
mirBase accessionNone
Sequence 
38- ACUGGACUUGGAGUCAGAAGGC -60
Get sequence