| MirGeneDB ID | Ete-Mir-361-v2 |
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| Family name |
MIR-361 (all species) |
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| Seed |
CCCCCAG |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
Ete-Mir-361-v1
|
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| Orthologues |
Bta-Mir-361-v2
Cfa-Mir-361-v2
Cpo-Mir-361-v2
Dno-Mir-361-v2
Hsa-Mir-361-v2
Mml-Mir-361-v2
Mmu-Mir-361-v2
Ocu-Mir-361-v2
Rno-Mir-361-v2
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
JH980378: 4175604-4175665 [-]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
AUAGUGAUUCUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUAUAAUUUGAAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCCCCUCCUCCUUUGAGAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAGUGAUUCUUUCCUG-- UUU UU U--| A U UAUAAU
GGA GGGAGC AUCAGAAUC CC GGGG ACU U
CCU CCUUCG UAGUCUUAG GG CCCC UGA U
CUAAGAGUUUCCUCCUCCC CUU UU UGU^ A C AAAAAG
120 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | The mature form of this variant is most highly expressed as a 2 nt shorter form but is rarely accompanied by a 19 nt corresponding 5p star read. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Ete-Mir-361-v2_5p* |
| mirBase accession | None |
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| Sequence |
0- UAUCAGAAUCUCCAGGGGUACU -22
Get sequence
|
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| Mature sequence |
Ete-Mir-361-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UCCCCCAGGUGUGAUUCUGAUUUG -62
Get sequence
|
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