MirGeneDB ID | Ete-Mir-326 |
Family name |
MIR-326 (all species) |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-326
Cfa-Mir-326
Cja-Mir-326
Cpo-Mir-326
Dno-Mir-326
Eca-Mir-326
Hsa-Mir-326
Laf-Mir-326
Mml-Mir-326
Mmr-Mir-326
Mmu-Mir-326
Ocu-Mir-326
Pab-Mir-326
Rno-Mir-326
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980327: 3977075-3977133 [-]
UCSC
|
Seed |
CUCUGGG |
Precursor (pre-Mir +30nt flank) |
GGGAGCCUCGUCCCUCCCGUCGGUUGGGCUGGAGGCAGGGCCUUUGUGAAGGCGGGUGGUGCUGGAUCGCCUCUGGGCCCUUCCUCCAGCCCAGAGGCGGAGUCACCGCGAGGGAGGCG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GGGAGCCUCGUCCCUCC---| GG C UUGUGA GGUGGU
CGUC UUGGGCUGGAGG AGGGCCU AGGCG \
GCGG GACCCGACCUCC UCCCGGG UCCGC G
GCGGAGGGAGCGCCACUGAG^ A- U UC---- UAGGUC
110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Ete-Mir-326_5p* |
mirBase accession | None |
Sequence |
0- GGAGGCAGGGCCUUUGUGAAGGCG -24
Get sequence
|
Mature sequence |
Ete-Mir-326_3p |
mirBase accession | None |
Sequence |
39- CCUCUGGGCCCUUCCUCCAG -59
Get sequence
|