MirGeneDB ID | Bta-Mir-326 |
Family name |
MIR-326 (all species) |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-326
|
Paralogues |
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Orthologues |
Cfa-Mir-326
Cja-Mir-326
Cpo-Mir-326
Dno-Mir-326
Eca-Mir-326
Ete-Mir-326
Hsa-Mir-326
Laf-Mir-326
Mml-Mir-326
Mmr-Mir-326
Mmu-Mir-326
Ocu-Mir-326
Pab-Mir-326
Rno-Mir-326
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037342.1: 54537281-54537340 [-]
UCSC
Ensembl
|
Seed |
CUCUGGG |
Precursor (pre-Mir +30nt flank) |
UGUUCCGGAGCCUCGUCUGUCUGUUGGGCUGGAGGCAGGGCCUUUGUGAAGGCGGGUUGUGCUCAGAUCGCCUCUGGGCCCUUCCUCCAGCCCAGAGGCGGAUUCACCGUGAGGCUGGUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGUUCCGGAGCCUCGUC---| G C UUGUGA GGUUGU
UGUCU UUGGGCUGGAGG AGGGCCU AGGCG G
GCGGA GACCCGACCUCC UCCCGGG UCCGC C
GUGGUCGGAGUGCCACUUAG^ - U UC---- UAGACU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second Drosha cut -1 on the 5p arm. |
3' NTU |
Yes
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Motifs | No |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Star sequence |
Bta-Mir-326_5p* |
mirBase accession | None |
Sequence |
0- GGAGGCAGGGCCUUUGUGAAGGCG -24
Get sequence
|
Mature sequence |
Bta-Mir-326_3p |
mirBase accession | MIMAT0009286 |
Sequence |
40- CCUCUGGGCCCUUCCUCCAG -60
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-326
|