| MirGeneDB ID | Esc-Mir-12552 |
|---|
| Family name |
MIR-12552 (all species) |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Obi-Mir-12552
Ovu-Mir-12552
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044509.1: 94709585-94709641 [-]
Ensembl
|
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| Seed |
AAAAUUC |
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Precursor
(pre-Mir +30nt flank) |
UUCUUUGAAUGAGGAAUUGGUGUGAAAGCCUAAAAUUCAAGUCUGAGGGUUCCUUUUAACUAAAGAACUUUCUGACUUGAAAUUUGAGCCUUCCCAUCCAGUAAGCAACACCCUGGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCUUUGAAUGAGGAAUU-| U A C A U CUUUU
GGUG GAA GC UAAA UUCAAGUC GAGGGUUC A
CUAC CUU CG GUUU AAGUUCAG CUUUCAAG A
GGGUCCCACAACGAAUGAC^ C C A A U AAAUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Esc-Mir-12552_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAAAAUUCAAGUCUGAGGGUUCC -23
Get sequence
|
|---|
| Star sequence |
Esc-Mir-12552_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- AACUUUCUGACUUGAAAUUUGA -57
Get sequence
|
|---|
