MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12552

Family name MIR-12552 (all species)
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12552  Ovu-Mir-12552 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ417010: 96312-96369 [-] Ensembl
Seed AAAAUUC
Precursor
(pre-Mir +30nt flank)
UGUCUUCAUUUAUUAAUUGUAGCGCAGUCCUAAAAUUCAAGUCUGAGGGUUCGUUUAUUAAAUUGAACUUUCUCACUUGAAAUUUUGGCCUUCUCUAUCAACAUGCAGCACACAUCAA
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Structure
        10          20        30        40        50        
UGUCUUCAUUUAUUAAUU--|   CGC  U  U   A       CU         UUUA 
                    GUAG   AG CC AAA UUCAAGU  GAGGGUUCG    U
                    UAUC   UC GG UUU AAGUUCA  CUUUCAAGU    U
AACUACACACGACGUACAAC^   UCU  C  U   A       CU         UAAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Obi-Mir-12552_5p

mirBase accessionNone
Sequence
0- UAAAAUUCAAGUCUGAGGGUUCG -23
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Star sequence

Obi-Mir-12552_3p*

mirBase accessionNone
Sequence
35- AACUUUCUCACUUGAAAUUUUGG -58
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