| MirGeneDB ID | Esc-Mir-12545 |
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| Family name |
MIR-12545 (all species) |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Mir-12545
Ovu-Mir-12545
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044501.1: 90956317-90956374 [+]
Ensembl
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| Seed |
GCAAAGG |
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Precursor
(pre-Mir +30nt flank) |
AUCUUCGCGUCUCCGGGCUUUACUGCAUCCAGCAAAGGGCUUGACGCUAGCGAUUUACAAUCACGGCUAGUGACAAAACCUUUGUGGGUAGCGGCGAGGCAUAUCACACAAUACGCUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUCUUCGCGUCUCCGGG-- UA -| G GC A GAUUUA
CUU CUGC AUCCA CAAAGG UUG CGCUAGC C
GGA GGCG UGGGU GUUUCC AAC GUGAUCG A
GUCGCAUAACACACUAUAC GC A^ - AA A GCACUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Esc-Mir-12545_5p |
| mirBase accession | None |
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| Sequence |
0- AGCAAAGGGCUUGACGCUAGCG -22
Get sequence
|
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| Star sequence |
Esc-Mir-12545_3p* |
| mirBase accession | None |
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| Sequence |
36- CUAGUGACAAAACCUUUGUGGG -58
Get sequence
|
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