| MirGeneDB ID | Obi-Mir-12545 |
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| Family name |
MIR-12545 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Mir-12545
Ovu-Mir-12545
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(PRJNA270931_OBI) |
KQ417087: 367474-367531 [+]
Ensembl
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| Seed |
GCAAAGG |
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Precursor
(pre-Mir +30nt flank) |
GUCAUAAAACGAAUAGGCUUUUCUGCACCCAGCAAAGGGCUUGACGCUAGCGCUUAUCCCCGACAGCUAGUGACAAAGCCUUUGUGGGCAGCGGUGAGCCAUAACACGAGUAUAUAGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GUCAUAAAACGAAUAGG---| UU A- G G GA- GCUUAU
CUU CUGC CCCA CAAAGG CUU CGCUAGC C
GAG GGCG GGGU GUUUCC GAA GUGAUCG C
AGAUAUAUGAGCACAAUACC^ U- AC - - ACA ACAGCC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Obi-Mir-12545_5p |
| mirBase accession | None |
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| Sequence |
0- AGCAAAGGGCUUGACGCUAGCG -22
Get sequence
|
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| Star sequence |
Obi-Mir-12545_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CUAGUGACAAAGCCUUUGUGGG -58
Get sequence
|
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