| MirGeneDB ID | Esc-Mir-12523 |
|---|
| Family name |
MIR-12523 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Obi-Mir-12523
Ovu-Mir-12523
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044490.1: 24342943-24343002 [-]
Ensembl
|
|---|
| Seed |
GUGGCAU |
|---|
Precursor
(pre-Mir +30nt flank) |
UGGGCGAGGCCACUACAGUUGGUCUAAUUCAGUGGCAUGUGAUGUUCUCUACGUAUCCAUAGUAACGACGAGAACAGUGGAUGUCAUUGAACGAAAUCAACAUGUCACACUUAGAAGAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGGCGAGGCCACUACA--| CUAA G GA UACGUAUCC
GUUGGU UUCAGUGGCAU U UGUUCUC A
CAACUA AAGUUACUGUA G ACAAGAG U
UGAGAAGAUUCACACUGUA^ AAGC G UG CAGCAAUGA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Esc-Mir-12523_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUGGCAUGUGAUGUUCUCUAC -22
Get sequence
|
|---|
| Co-mature sequence |
Esc-Mir-12523_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- CGAGAACAGUGGAUGUCAUUGA -60
Get sequence
|
|---|
