MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12523

Family name MIR-12523 (all species)
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12523  Ovu-Mir-12523 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ429281: 7572-7631 [-] Ensembl
Seed GAGAACA
Precursor
(pre-Mir +30nt flank)
UCAAUGAGUUUAAUGCAGUCAGUUGAGUUUAGUGGCAUUUAAUGUUCUCUACGUAACAUUAGCAACGACGAGAACAGUAGAUGUCAUUGAGUGAAACUAACAUCUCACAAUUUAGGGCUC
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Structure
        10          20        30        40        50         
UCAAUGAGUUUAAUGCA--| C    GA               A       UACGUAACA 
                   GU AGUU  GUUUAGUGGCAUUUA UGUUCUC         U
                   CA UCAA  UGAGUUACUGUAGAU ACAAGAG         U
CUCGGGAUUUAACACUCUA^ A    AG               G       CAGCAACGA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Obi-Mir-12523_5p* (predicted)

mirBase accessionNone
Sequence
0- AGUGGCAUUUAAUGUUCUCUAC -22
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Mature sequence

Obi-Mir-12523_3p

mirBase accessionNone
Sequence
38- CGAGAACAGUAGAUGUCAUUGA -60
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