MirGeneDB ID | Obi-Mir-12523 |
Family name |
MIR-12523 (all species) |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Esc-Mir-12523
Ovu-Mir-12523
|
Node of Origin (locus) |
Coleoidea
|
Node of Origin (family) |
Coleoidea
|
Genome context (PRJNA270931_OBI) |
KQ429281: 7572-7631 [-]
Ensembl
|
Seed |
GAGAACA |
Precursor (pre-Mir +30nt flank) |
UCAAUGAGUUUAAUGCAGUCAGUUGAGUUUAGUGGCAUUUAAUGUUCUCUACGUAACAUUAGCAACGACGAGAACAGUAGAUGUCAUUGAGUGAAACUAACAUCUCACAAUUUAGGGCUC
Get precursor sequence
|
Structure | 10 20 30 40 50
UCAAUGAGUUUAAUGCA--| C GA A UACGUAACA
GU AGUU GUUUAGUGGCAUUUA UGUUCUC U
CA UCAA UGAGUUACUGUAGAU ACAAGAG U
CUCGGGAUUUAACACUCUA^ A AG G CAGCAACGA
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Obi-Mir-12523_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGUGGCAUUUAAUGUUCUCUAC -22
Get sequence
|
Mature sequence |
Obi-Mir-12523_3p |
mirBase accession | None |
Sequence |
38- CGAGAACAGUAGAUGUCAUUGA -60
Get sequence
|