MirGeneDB 3.0
MirGeneDB ID

Emu-Mir-2018-P1

Family name MIR-2018 (all species)
Species Muellers freshwater sponge (Ephydatia muelleri)
MiRBase ID
Paralogues Emu-Mir-2018-P2 
Orthologues Aqu-Mir-2018 
Node of Origin (locus) E. muelleri
Node of Origin (family) Demospongiae
Genome context
(GCA_013339895_Emu)		 JABACO010000010.1: 9538959-9539030 [+]
Seed GUCGGAG
Precursor
(pre-Mir +30nt flank)		 
GUGUACUAAAAUCUUAACAAUGAAGCAGUGUGUCGGAGCCGGAGGUUCCGGAACAAAAGAGUUCACAACAAACUCUAUUCCGGACUCUCUGUCGCCGACACACAGGCAUUGUCUAAGCUACGCGCAUGCGCU
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Structure
        10            20        30        40        50        60     
GUGUACUAAAAUCUUAA----|    AAGCA         AGC     GU      ACAAAAGAGUUC 
                     CAAUG     GUGUGUCGG   CGGAG  UCCGGA            A
                     GUUAC     CACACAGCC   GUCUC  AGGCCU            C
UCGCGUACGCGCAUCGAAUCU^    GGA--         GCU     UC      UAUCUCAAACAA 
130       120       110         100        90        80        70
Deep sequencing
CommentThis miRNA family is only known in G3 + G4 demospoonges.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ge Ju
Mature sequence

Emu-Mir-2018-P1_5p (predicted)
mirBase accessionNone
Sequence 
0- UGUCGGAGCCGGAGGUUCCGGA -22
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Star sequence

Emu-Mir-2018-P1_3p* (predicted)
mirBase accessionNone
Sequence 
50- CGGACUCUCUGUCGCCGACACA -72
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