| MirGeneDB ID | Efe-Mir-2691-P3 |
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| Family name |
MIR-2691 (all species) |
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| Seed |
UUUGCAA |
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| Species |
Common brandling worm (Eisenia fetida) |
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| MiRBase ID |
|
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| Paralogues |
Efe-Mir-2691-P1
Efe-Mir-2691-P2
Efe-Mir-2691-P4
|
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| Orthologues |
Cte-Mir-2691
|
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| Node of Origin (locus) |
E. fetida
|
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| Node of Origin (family) |
Annelida
|
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Genome context
(Efe_combined) |
Efet.01.299984: 674-735 [-]
|
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Precursor
(pre-Mir +30nt flank) |
GCGAUGUUUUCUGCCCGUGCGUUGGUGGCAGGCAGUGACAUUUCAUGCAAAGACCGUUACUUAAGAAGAGGUUUUGCAAAGUAUCACUGCUUACCACAGACGUUACUUUCGAGAACAGGAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCGAUGUUUUCUGCCCGU-| G C C CA A GUUACU
GCGUU GUGG AGGCAGUGA AUUU UGCAA GACC U
UGCAG CACC UUCGUCACU UGAA ACGUU UUGG A
UGAGGACAAGAGCUUUCAU^ A A A -- - AGAAGA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Efe-Mir-2691-P3_5p* |
| mirBase accession | None |
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| Sequence |
0- GGCAGUGACAUUUCAUGCAAAGACC -25
Get sequence
|
|---|
| Mature sequence |
Efe-Mir-2691-P3_3p |
| mirBase accession | None |
|---|
| Sequence |
41- UUUUGCAAAGUAUCACUGCUU -62
Get sequence
|
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