MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-2691-P2

Family name MIR-2691 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2691-P1  Efe-Mir-2691-P3  Efe-Mir-2691-P4 
Orthologues Cte-Mir-2691  Pdu-Mir-2691-P2a  Pdu-Mir-2691-P2b  Snu-Mir-2691 
Node of Origin (locus) E. fetida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(Efe_combined)		 Efet.01.1650192: 337-401 [+]
Seed UUUGCAA
Precursor
(pre-Mir +30nt flank)		 
GAUAUAGACGAAGUUGACGGCCGACCCGACUGACGGUGACGGUCUGCAAACCCGUGUAAAGAUCGAAACAGGUUUUGCAAUGCAUCACGGUCAGUUGGGCGAGCCACGUAGAAGAAACGACGCUG
Get precursor sequence
Structure
        10          20         30        40         50        60  
GAUAUAGACGAAGUUGAC--   -| A          G    CG  C-      C  GUGUAAAG 
                    GGC CG CCCGACUGAC GUGA  GU  UGCAAA CC        \
                    CCG GC GGGUUGACUG CACU  CG  ACGUUU GG        A
GUCGCAGCAAAGAAGAUGCA   A^ -          G    A-  UA      U  ACAAAGCU 
   120       110       100         90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
To
Star sequence

Efe-Mir-2691-P2_5p*
mirBase accessionNone
Sequence 
0- UGACGGUGACGGUCUGCAAACCC -23
Get sequence
Mature sequence

Efe-Mir-2691-P2_3p
mirBase accessionNone
Sequence 
42- UUUUGCAAUGCAUCACGGUCAGU -65
Get sequence