| MirGeneDB ID | Dya-Mir-959-v2 |
|---|
| Family name |
MIR-959 (all species) |
|---|
| Seed |
UUGUCAU |
|---|
| Species |
Fruit fly (Drosophila yakuba) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Dya-Mir-959-v1
|
|---|
| Orthologues |
Dan-Mir-959-v2
Dme-Mir-959-v2
Dsi-Mir-959-v2
|
|---|
| Node of Origin (locus) |
D. melanogaster group
|
|---|
| Node of Origin (family) |
D. melanogaster group
|
|---|
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 13552287-13552347 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUAAAUUGAUUUUAACUUUGUUCUAUAUUCUUAGUACUCGGGUUGACAAAGACCUUUCCUUGCGGCGCCUUUGUCAUCGGGGGUAUUAUGAAAUAUAGCUCAAAGAAACUGCAAGGAUCAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUAAAUUGAUUUUAACU- UU -| U GGGU ACCUUUCC
UUG CUAUA UUC UAGUACUC UGACAAAG \
AAC GAUAU AAG AUUAUGGG ACUGUUUC U
UACUAGGAACGUCAAAGA UC A^ U GGCU CGCGGCGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dya-Mir-959-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UUAGUACUCGGGUUGACAAAGA -22
Get sequence
|
|---|
| Mature sequence |
Dya-Mir-959-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UUUGUCAUCGGGGGUAUUAUGA -61
Get sequence
|
|---|
