| MirGeneDB ID | Dre-Novel-4 |
|---|
| Family name |
DRE-NOVEL-4 (all species) |
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| Seed |
CAGGAAU |
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| Species |
Zebrafish (Danio rerio) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. rerio
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| Node of Origin (family) |
D. rerio
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Genome context
(danRer11) |
chr15: 37725346-37725406 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUAUGGACCAUGUUUGUUACUUGUAGUUUACAGGAAUUUGGCCACUGCACUCUUUCAGAUAAGUUUGGUGCUGUGGCCAAAUUCCUGUAAACUUCAGUAAUUUAUUCAAUAAACAGCAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAUAUGGACCAUGUUUG---| U U U CUUUCAG
UUACU G AGUUUACAGGAAUUUGGCCAC GCACU \
AAUGA C UCAAAUGUCCUUAAACCGGUG CGUGG A
GGACGACAAAUAACUUAUUU^ - U U UUUGAAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Mature sequence |
Dre-Novel-4_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACAGGAAUUUGGCCACUGCACU -22
Get sequence
|
|---|
| Co-mature sequence |
Dre-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UGCUGUGGCCAAAUUCCUGUAA -61
Get sequence
|
|---|
