| MirGeneDB ID | Dre-Mir-2191 |
|---|
| Family name |
MIR-2191 (all species) |
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| Species |
Zebrafish (Danio rerio) |
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| MiRBase ID |
dre-mir-2191
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. rerio
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| Node of Origin (family) |
D. rerio
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Genome context
(danRer11) |
chr23: 36790250-36790310 [+]
UCSC
Ensembl
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| Seed |
CACACCU |
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Precursor
(pre-Mir +30nt flank) |
UCGGUGCCUUGCUCAAGGGUCUCACCUCUGCCAUGGUAUUGAAGGUGGUAGAGAGUGUUUGUACAUUCACUCACACCUACAAUCCCUGGCAGUACUGAGACUCAAACCUGCAAUCUUUGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UCGGUGCCUUGCUCAAG--| CCU U U A GU AGAGUGUU
GGUCUCA CUGCCA GG AUUG AGGUG AG U
UCAGAGU GACGGU CC UAAC UCCAC UC G
AGGUUUCUAACGUCCAAAC^ CAU C - A AC ACUUACAU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Star sequence |
Dre-Mir-2191_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCAUGGUAUUGAAGGUGGUAGA -22
Get sequence
|
|---|
| Mature sequence |
Dre-Mir-2191_3p |
| mirBase accession | MIMAT0011300 |
|---|
| Sequence |
40- UCACACCUACAAUCCCUGGCA -61
Get sequence
|
|---|
| Proposed targets |
TargetScanFish: dre-miR-2191
|
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