MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-1271

Family name MIR-1271 (all species)
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1271  Cfa-Mir-1271  Cpo-Mir-1271  Eca-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Laf-Mir-1271  Mml-Mir-1271  Mmu-Mir-1271  Pab-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH562710: 929911-929968 [+] UCSC Ensembl
Seed UUGGCAC
Precursor
(pre-Mir +30nt flank)
AGCCCUGUACCUGCAGCACCCAGAUGAGUGCUUGGCACCUAGUAAGCACACAGUAAACUCUUGUUGGGUGCCUGCUGUGUGCCAGGCAUGGAGCUGGGGCUUUUGGGGGUCCAAAGGU
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Structure
        10          20        30        40        50        
AGCCCUGUACCUGCAGCA--|    AUGA           C     A    A  GUAAA 
                    CCCAG    GUGCUUGGCAC UAGUA GCAC CA     C
                    GGGUC    UACGGACCGUG GUCGU CGUG GU     U
UGGAAACCUGGGGGUUUUCG^    GAGG           U     C    G  UGUUC 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Dno-Mir-1271_5p

mirBase accessionNone
Sequence
0- CUUGGCACCUAGUAAGCACACA -22
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Star sequence

Dno-Mir-1271_3p* (predicted)

mirBase accessionNone
Sequence
36- GGUGCCUGCUGUGUGCCAGGCA -58
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