| MirGeneDB ID | Bta-Mir-1271 |
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| Family name |
MIR-1271 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-1271
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| Paralogues |
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| Orthologues |
Cfa-Mir-1271
Cpo-Mir-1271
Dno-Mir-1271
Eca-Mir-1271
Ete-Mir-1271
Hsa-Mir-1271
Laf-Mir-1271
Mml-Mir-1271
Mmu-Mir-1271
Pab-Mir-1271
Rno-Mir-1271
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037334.1: 37843340-37843397 [+]
UCSC
Ensembl
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| Seed |
UUGGCAC |
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Precursor
(pre-Mir +30nt flank) |
ACCUCUGUGUCCCCAGCACCCAGAUCAGUGCUUGGCACCUAGUAAGUACUCAGUAUAUACUUGUUGAGUGCCUGCUAUGUGCCAGGCAUUGUGCUGAGGGCUUUGGGGGGAUCCAGAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACCUCUGUGUCCCCAGCA- -| AU C A GUAUA
CC CAG CAGUGCUUGGCAC UAGUA GUACUCA U
GG GUC GUUACGGACCGUG AUCGU CGUGAGU A
GAGACCUAGGGGGGUUUCG A^ GU U C UGUUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-1271_5p |
| mirBase accession | MIMAT0009975 |
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| Sequence |
0- CUUGGCACCUAGUAAGUACUCA -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-1271
|
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| Star sequence |
Bta-Mir-1271_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- AGUGCCUGCUAUGUGCCAGGCA -58
Get sequence
|
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