MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-987

Family name MIR-987 (all species)
Seed AAAGUAA
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Dan-Mir-987  Dme-Mir-987  Dsi-Mir-987  Dya-Mir-987 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Dmoj_caf1)
scaffold_6496: 4307064-4307129 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUAUCGCGAAUAAACUGUUGAACUGUGCUUAAAGUAAAUAGUCUGGAUUGAUGAAAGUUUAUAUCUAAGAAUUCAUCAACAGGCAUUUACUUCAACUGCAGUUUAAACGAAAUGCAACAGAAGCA
Get precursor sequence
Structure
        10         20        30        40        50        60    
GAUAUCGCGAAUAAACUG-|        GC  A        A     GA        AGUUUAU 
                   UUGAACUGU  UU AAGUAAAU GUCUG  UUGAUGAA       A
                   AAUUUGACG  AA UUCAUUUA CGGAC  AACUACUU       U
ACGAAGACAACGUAAAGCA^        UC  C        -     --        AAGAAUC 
    120       110       100        90           80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-987_5p

mirBase accessionNone
Sequence
0- UAAAGUAAAUAGUCUGGAUUGAUGAA -26
Get sequence
Star sequence

Dmo-Mir-987_3p*

mirBase accessionNone
Sequence
44- CAUCAACAGGCAUUUACUUCAA -66
Get sequence