| MirGeneDB ID | Dlo-Mir-2796 |
|---|
| Family name |
MIR-2796 (all species) |
|---|
| Species |
Braconid wasp (Diachasmimorpha longicaudata) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-2796
Aga-Mir-2796
Bge-Mir-2796
Hme-Mir-2796
Tca-Mir-2796
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(GCF_034640455.1_iyDiaLong2_genomic) |
NC_087229.1: 4887566-4887624 [+]
Ensembl
|
|---|
| Seed |
UAGGCCG |
|---|
Precursor
(pre-Mir +30nt flank) |
UGAGAUGGCAACAAUGCGGACAUUGAGGUCAGGGGUUUCUAUCGGCCUCCAGCAGCAAAGACAGUUGUAGGCCGGCGGAAACUACUUGCUCUCUUCGUCCCAAAUCAACAGCUACUAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGAGAUGGCAACAAUGC-- AUU GU -| AU C CAGCA
GGAC GAG CAGG GGUUUCU CGGCCU CAG A
CCUG CUC GUUC UCAAAGG GCCGGA GUU A
UUAUCAUCGACAACUAAAC CUU UC A^ CG U GACAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | There is a second Dicer cut -1 on both arms. |
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dlo-Mir-2796_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGGGUUUCUAUCGGCCUCCAG -22
Get sequence
|
|---|
| Mature sequence |
Dlo-Mir-2796_3p |
| mirBase accession | None |
|---|
| Sequence |
36- GUAGGCCGGCGGAAACUACUUGC -59
Get sequence
|
|---|
