MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-5305-P9a

Family name MIR-5305 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-5305-P9b  Csc-Mir-5305-P10 
Orthologues Isc-Mir-5305 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Chelicerata
Genome context
(GCF_000671375.1_CSC)		 NW_019384740.1: 265526-265585 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-5305-P9a)		 Mir-5305-P9a NW_019384740.1: 265526-265585 [+] Ensembl
Mir-5305-P9b NW_019384740.1: 267777-267836 [+] Ensembl
Seed UGGGCUU
Precursor
(pre-Mir +30nt flank)		 
GAGAUAGAAGACAACCCAUUUGGCGGACUCUAAGUUAAUCUCCAAGCCCAAUGGUCAUUUACGUCAAUUGGGCUUGAAGAUUAACUUAGACCCCGCCAAAUACGUCAUAUAACGACAGGA
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Structure
        10          20        30        40        50         
GAGAUAGAAGACAACCC--|        AC             C          GGUCAU 
                   AUUUGGCGG  UCUAAGUUAAUCU CAAGCCCAAU      U
                   UAAACCGCC  AGAUUCAAUUAGA GUUCGGGUUA      U
AGGACAGCAAUAUACUGCA^        CC             A          ACUGCA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-5305-P9a_5p*
mirBase accessionNone
Sequence 
0- UAAGUUAAUCUCCAAGCCCAAUG -23
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Mature sequence

Csc-Mir-5305-P9a_3p
mirBase accessionNone
Sequence 
37- UUGGGCUUGAAGAUUAACUUAGA -60
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