MirGeneDB 2.1

MirGeneDB ID

Csc-Mir-5305-P10

Family name MIR-5305 (all species)
Seed UGGGCUU
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-5305-P9a  Csc-Mir-5305-P9b 
Orthologues Isc-Mir-5305 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Chelicerata
Genome context
(GCF_000671375.1_CSC)
NW_019384372.1: 165279-165338 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAGAAAAAAAAGUCAUUUGGCGGACUCCAAGUUAAUCUCCAAGCCCAGUGGUUAGAUGGUUAAAUUGGGCUUGAAGAUUAAUUUAGACCCCGCUAAAUACGUCAUACAACUAAGAAG
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Structure
        10          20        30        40        50         
AAGAAGAAAAAAAAGUC--|        AC  C          C          GGUUAG 
                   AUUUGGCGG  UC AAGUUAAUCU CAAGCCCAGU      A
                   UAAAUCGCC  AG UUUAAUUAGA GUUCGGGUUA      U
GAAGAAUCAACAUACUGCA^        CC  A          A          AAUUGG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-5305-P10_5p*

mirBase accessionNone
Sequence
0- CAAGUUAAUCUCCAAGCCCAGUG -23
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Mature sequence

Csc-Mir-5305-P10_3p

mirBase accessionNone
Sequence
37- UUGGGCUUGAAGAUUAAUUUAGA -60
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