MirGeneDB 3.0

MirGeneDB ID

Csc-Mir-276-P10

Family name MIR-276 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-276-P11a  Csc-Mir-276-P11b 
Orthologues Bge-Mir-276  Dlo-Mir-276  Dma-Mir-276  Dpu-Mir-276  Hme-Mir-276  Isc-Mir-276  Tca-Mir-276  Tur-Mir-276 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Arthropoda
Genome context
(GCF_000671375.1_CSC)
NW_019384353.1: 622467-622524 [+] Ensembl
Seed AGGAACU
Precursor
(pre-Mir +30nt flank)
UCGUCCGUCUACAAGUUUGGAAUUAUCGUGAGCGAGGUAUGGAGUUCUUACUGUGCACAAAACAGGUAGGAACUUCAUACCAUGCUCGCGAUGACUUCAAAUAACCCUUCUGUGGAUU
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Structure
        10          20        30        40        50        
UCGUCCGUCUACAAGUU--|   A            A                 GUGCA 
                   UGGA UUAUCGUGAGCG GGUAUGGAGUUCUUACU     C
                   ACUU AGUAGCGCUCGU CCAUACUUCAAGGAUGG     A
UUAGGUGUCUUCCCAAUAA^   C            A                 ACAAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-276-P10_5p*

mirBase accessionNone
Sequence
0- AGCGAGGUAUGGAGUUCUUACU -22
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Mature sequence

Csc-Mir-276-P10_3p

mirBase accessionNone
Sequence
36- UAGGAACUUCAUACCAUGCUCG -58
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