| MirGeneDB ID | Cpo-Mir-511 |
|---|
| Family name |
MIR-511 (all species) |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-511
|
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| Paralogues |
|
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| Orthologues |
Cja-Mir-511
Hsa-Mir-511
Mml-Mir-511
Mmr-Mir-511
Mmu-Mir-511
Pab-Mir-511
Rno-Mir-511
|
|---|
| Node of Origin (locus) |
Euarchontoglires
|
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| Node of Origin (family) |
Euarchontoglires
|
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Genome context
(cavPor3) |
scaffold_120: 1077095-1077155 [-]
UCSC
|
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| Seed |
AUGUGUA |
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Precursor
(pre-Mir +30nt flank) |
CCACCGACAAGGAAACAAAUAGAUACCCAUCAUGUCUUUUGCUCUGCAGUCAGUAAAUAUUUAUUUGUGAAUGUGUAGCAGAAGACAGACUGGGGAUCCAUUUAUCUCAAAGAUGAAGACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCACCGACAAGGAAACAAAUA-- A -| A CU G GUAAAUA
GAU CCCA UC UGUCUUUUGCU GCA UCA \
CUA GGGU AG ACAGAAGACGA UGU AGU U
GCAGAAGUAGAAACUCUAUUUAC G C^ - UG A GUUUAUU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
| |
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| Star sequence |
Cpo-Mir-511_5p* |
| mirBase accession | MIMAT0047331 |
|---|
| Sequence |
0- CAUGUCUUUUGCUCUGCAGUCA -22
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-511_3p |
| mirBase accession | MIMAT0047332 |
|---|
| Sequence |
39- AAUGUGUAGCAGAAGACAGACU -61
Get sequence
|
|---|
