| MirGeneDB ID | Cpo-Mir-423 |
|---|
| Family name |
MIR-423 (all species) |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-423
|
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| Paralogues |
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| Orthologues |
Bta-Mir-423
Cfa-Mir-423
Cja-Mir-423
Dno-Mir-423
Eca-Mir-423
Ete-Mir-423
Hsa-Mir-423
Laf-Mir-423
Mml-Mir-423
Mmr-Mir-423
Mmu-Mir-423
Ocu-Mir-423
Pab-Mir-423
Rno-Mir-423
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(cavPor3) |
scaffold_32: 22509141-22509199 [-]
UCSC
|
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| Seed |
GAGGGGC |
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Precursor
(pre-Mir +30nt flank) |
AAACUUGUGAGGAAAUAAAGGAAGUUAGGCUGAGGGGCAGAGAGCGAGACUUUUCUAUUUUCCAAAAGCUCGGUCUGAGGCCCCUCAGUCUUGCUUCCUACCCCGCGCUUGAGUUUCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAACUUGUGAGGAAAUAA-- U AG-| G A UCUAU
AGGAAGU AGGCUGAGGGGC AGA CGAG CUUU \
UCCUUCG UCUGACUCCCCG UCU GCUC GAAA U
CUCUUUGAGUUCGCGCCCCA U GAG^ G - ACCUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
| |
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| Mature sequence |
Cpo-Mir-423_5p |
| mirBase accession | MIMAT0047241 |
|---|
| Sequence |
0- UGAGGGGCAGAGAGCGAGACUUU -23
Get sequence
|
|---|
| Co-mature sequence |
Cpo-Mir-423_3p |
| mirBase accession | MIMAT0047242 |
|---|
| Sequence |
36- AGCUCGGUCUGAGGCCCCUCAGU -59
Get sequence
|
|---|
