MirGeneDB ID | Bta-Mir-423 |
Family name |
MIR-423 (all species) |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-423
|
Paralogues |
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Orthologues |
Cfa-Mir-423
Cja-Mir-423
Cpo-Mir-423
Dno-Mir-423
Eca-Mir-423
Ete-Mir-423
Hsa-Mir-423
Laf-Mir-423
Mml-Mir-423
Mmr-Mir-423
Mmu-Mir-423
Ocu-Mir-423
Pab-Mir-423
Rno-Mir-423
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037346.1: 21238023-21238081 [+]
UCSC
Ensembl
|
Seed |
GAGGGGC |
Precursor (pre-Mir +30nt flank) |
AAACUUGUGAGGAAAUAAAGGAAGUUAGGCUGAGGGGCAGAGAGCGAGACUUUUCUAUUUUCCAAAAGCUCGGUCUGAGGCCCCUCAGUCUUGCUUCCUACCCCGCGCUUGAGUUUCUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AAACUUGUGAGGAAAUAA-- U AG-| G A UCUAU
AGGAAGU AGGCUGAGGGGC AGA CGAG CUUU \
UCCUUCG UCUGACUCCCCG UCU GCUC GAAA U
CUCUUUGAGUUCGCGCCCCA U GAG^ G - ACCUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Mature sequence |
Bta-Mir-423_5p |
mirBase accession | MIMAT0012537 |
Sequence |
0- UGAGGGGCAGAGAGCGAGACUUU -23
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-423-5p
|
Co-mature sequence |
Bta-Mir-423_3p |
mirBase accession | MIMAT0003831 |
Sequence |
36- AGCUCGGUCUGAGGCCCCUCAGU -59
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-423-3p
|