MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-874

Family name MIR-874 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-874  Cfa-Mir-874  Cpo-Mir-874  Dno-Mir-874  Eca-Mir-874  Ete-Mir-874  Hsa-Mir-874  Laf-Mir-874  Mml-Mir-874  Mmr-Mir-874  Mmu-Mir-874  Ocu-Mir-874  Pab-Mir-874  Rno-Mir-874 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021916.1: 34094820-34094879 [-] UCSC Ensembl
Seed UGCCCUG
Precursor
(pre-Mir +30nt flank)		 
CCUUCGGAUGAAUUGUUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCUCGCUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUUCUGCCCAGCUCACC
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Structure
        10           20        30        40        50         
CCUUCGGAUGAAUUGUU---|  G      CUG   C   A  CA        A  GAGAC 
                    GGU UUAGCC   CGG CCC CG  CCAGGGUA GA     U
                    CCG GGUCGG   GCC GGG GC  GGUCCCGU CU     C
CCACUCGACCCGUCUUCCGU^  -      UCA   A   A  CC        C  UCGCU 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-874_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGGCCCCACGCACCAGGGUAAGA -23
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Mature sequence

Cja-Mir-874_3p
mirBase accessionNone
Sequence 
37- CUGCCCUGGCCCGAGGGACCGAC -60
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