MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-582

Family name MIR-582 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-582
Paralogues Cfa-Mir-582-v1 
Orthologues Cja-Mir-582  Eca-Mir-582  Ocu-Mir-582 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr2: 46497283-46497340 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-582-v2)		 Mir-582-v1 chr2: 46497282-46497341 [-] UCSC Ensembl
Mir-582-v2 chr2: 46497283-46497340 [-] UCSC Ensembl
Variant

Cfa-Mir-582-v2
Seed ACAGUUG
Precursor
(pre-Mir +30nt flank)		 
ACCUCAACACUUCAGUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUCUAGCUAAUUGUAACCAGUUGAACAACUGAACCCAAAGGGUGCAAAGUGGAAACAUUUCAUUG
Get precursor sequence
Structure
        10          20        30        40        50        
ACCUCAACACUUCAGUC--|           UUA            CA     UAAUCU 
                   UGUACUCUUUGG   CAGUUGUUCAAC  GUUAC      A
                   ACGUGGGAAACC   GUCAACAAGUUG  CAAUG      G
GUUACUUUACAAAGGUGAA^           CAA            AC     UUAAUC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-582-v2_5p
mirBase accessionMIMAT0009916
Sequence 
0- UACAGUUGUUCAACCAGUUACU -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-582
miRDB: MIMAT0009916
Star sequence

Cfa-Mir-582-v2_3p*
mirBase accessionNone
Sequence 
36- UAACCAGUUGAACAACUGAACC -58
Get sequence
Variant

Cfa-Mir-582-v1
Seed UACAGUU
Precursor
(pre-Mir +30nt flank)		 
GACCUCAACACUUCAGUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUCUAGCUAAUUGUAACCAGUUGAACAACUGAACCCAAAGGGUGCAAAGUGGAAACAUUUCAUUGA
Get precursor sequence
Structure
        10          20        30        40        50         
GACCUCAACACUUCAGUC--|           UUA            CA     UAAUCU 
                    UGUACUCUUUGG   CAGUUGUUCAAC  GUUAC      A
                    ACGUGGGAAACC   GUCAACAAGUUG  CAAUG      G
AGUUACUUUACAAAGGUGAA^           CAA            AC     UUAAUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-582-v1_5p
mirBase accessionMIMAT0009916
Sequence 
0- UUACAGUUGUUCAACCAGUUAC -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-582
miRDB: MIMAT0009916
Star sequence

Cfa-Mir-582-v1_3p*
mirBase accessionNone
Sequence 
38- AACCAGUUGAACAACUGAACCC -60
Get sequence