MirGeneDB 2.1

MirGeneDB ID

Cel-Mir-4813

Family name MIR-4813 (all species)
Seed GACUAUC
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-4813
Paralogues
Orthologues Cbr-Mir-4813 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)
chrIII: 4571648-4571707 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCACAACUAUUCUAUUCUUUAUUUCACCAGACUAUCUAGGAAAUAUUGAACUAAUACAAAUUUUAGUUCAAUAUACCGGAUGGUCUGGUGAAAGCAACAUGCGUUGUAAGUUCUUUUU
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Structure
        10        20          30        40        50        60
UGCCACAACUAUUCUAUUCUUUA--|               A  AA          AAUAC 
                         UUUCACCAGACUAUCU GG  AUAUUGAACU     A
                         AAAGUGGUCUGGUAGG CC  UAUAACUUGA     A
UUUUUCUUGAAUGUUGCGUACAACG^               -  A-          UUUUA 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Wt Da Ea Mi Yo Yo
Mature sequence

Cel-Mir-4813_5p

mirBase accessionMIMAT0020000
Sequence
0- AGACUAUCUAGGAAAUAUUGAACU -24
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Co-mature sequence

Cel-Mir-4813_3p

mirBase accessionMIMAT0020001
Sequence
38- UUCAAUAUACCGGAUGGUCUGG -60
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