MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-4813

Family name MIR-4813 (all species)
Seed GGCUUUC
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-4813
Paralogues
Orthologues Cel-Mir-4813 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)
III: 6986657-6986716 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUCAGUCUCUAGUAUUCCCAGUGCUCACUAGGCUUUCCCGUUUUGUUGAACUAAUAGCAAAUUUAAGUUCAAUAUACAGGAUAGCCCCGUGAGUGGAAAGAAAGCAUAACUUUGUAUGU
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Structure
        10             20        30        40        50          
AUUCAGUCUCUAGUAUUC-----| AGU      UA    U   C  UU         AAUAGC 
                       CC   GCUCAC  GGCU UCC GU  UGUUGAACU      \
                       GG   UGAGUG  CCGA AGG CA  AUAACUUGA      A
UGUAUGUUUCAAUACGAAAGAAA^ ---      CC    U   A  U-         AUUUAA 
.       110       100           90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Mature sequence

Cbr-Mir-4813_5p

mirBase accessionNone
Sequence
0- AGGCUUUCCCGUUUUGUUGAACU -23
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Co-mature sequence

Cbr-Mir-4813_3p

mirBase accessionMIMAT0029916
Sequence
38- UUCAAUAUACAGGAUAGCCCCG -60
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