MirGeneDB 2.1
MirGeneDB ID

Cbr-Mir-90-P2

Family name MIR-90 (all species)
Seed GAUAUGU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-90b
Paralogues Cbr-Mir-90-P1 
Orthologues Cel-Mir-90 
Node of Origin (locus) C. briggsae
Node of Origin (family) Caenorhabditis
Genome context
(CB4)		 III: 14456991-14457056 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-90-P2)		 Bantam-P2 III: 14440888-14440953 [-] Ensembl
Mir-238 III: 14445088-14445154 [-] Ensembl
Mir-90-P1 III: 14455369-14455431 [+] Ensembl
Mir-90-P2 III: 14456991-14457056 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUACUGUAGAUCCUGCAGCACCAUUUCAAGCGGCCUUCAACGACUAUAUCAACCGAAUCCAAAUUCGCGAGUUGAUAUGUUGUUUUGAAUGUCACUUGAGGUUUUUGCUUUUUCGGAUUUUAUCCU
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Structure
        10         20         30          40        50        60  
UUACUGUAGAUCCUGCA-   CC-        C   C    --|    U        CGAAUCCA 
                  GCA   AUUUCAAG GGC UUCA  ACGAC AUAUCAAC        \
                  CGU   UGGAGUUC CUG AAGU  UGUUG UAUAGUUG        A
UCCUAUUUUAGGCUUUUU   UUU        A   U    UU^    -        AGCGCUUA 
    120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-90-P2_5p*
mirBase accessionMIMAT0011471
Sequence 
0- CGGCCUUCAACGACUAUAUCAAC -23
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Mature sequence

Cbr-Mir-90-P2_3p
mirBase accessionMIMAT0011472
Sequence 
42- UGAUAUGUUGUUUUGAAUGUCACU -66
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