MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-7595-P1

Family name MIR-7595 (all species)
Seed ACCCGUU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7595
Paralogues Cbr-Mir-7595-P2a  Cbr-Mir-7595-P2b 
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)
I: 14505055-14505117 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUUAUGUCGCAUCCCUAAACGGCAUGGUACCCGUUAACUCGAAGAAAGUGUUAAGCAUCAUCUUUCACACUUUCUCGGUUGACGGGUACCGGGCCCAAGUAUGGCUUUAUGGGUCCUCUA
Get precursor sequence
Structure
        10        20          30        40        50        60  
UUUUUUAUGUCGCAUCCCUAAAC--|  A              U   A        UAAGCAU 
                         GGC UGGUACCCGUUAAC CGA GAAAGUGU       \
                         CCG GCCAUGGGCAGUUG GCU CUUUCACA       C
AUCUCCUGGGUAUUUCGGUAUGAAC^  G              -   -        CUUUCUA 
 120       110       100        90         80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Mature sequence

Cbr-Mir-7595-P1_5p

mirBase accessionMIMAT0029602
Sequence
0- UACCCGUUAACUCGAAGAAAGUGU -24
Get sequence
Star sequence

Cbr-Mir-7595-P1_3p*

mirBase accessionNone
Sequence
41- ACUUUCUCGGUUGACGGGUACC -63
Get sequence