MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-7587

Family name MIR-7587 (all species)
Seed CUAGAAU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7587
Paralogues
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)
X: 20533902-20533963 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-7587)
Mir-7587 X: 20533902-20533963 [+] Ensembl
Mir-2222-P2a X: 20535807-20535871 [+] Ensembl
Mir-2222-P2b X: 20537177-20537241 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUUUUCGAAAACUUCUGCACUGGCUCGUUCUAGAAUCCCUUCAGGCGUUACUCACCUAGUGUUGUGAGUAACGUUGAGGAAUUUUAGAACAGGCCUAAUUCAACUAGUCAUUCUCUUCUU
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Structure
        10        20          30        40        50        60 
GCUUUUUCGAAAACUUCUGCACU--|  UC          C    CA         CACCUA 
                         GGC  GUUCUAGAAU CCUU  GGCGUUACU      G
                         CCG  CAAGAUUUUA GGAG  UUGCAAUGA      U
UUCUUCUCUUACUGAUCAACUUAAU^  GA          A    --         GUGUUG 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Mature sequence

Cbr-Mir-7587_5p

mirBase accessionMIMAT0029590
Sequence
0- UCUAGAAUCCCUUCAGGCGUUACU -24
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Star sequence

Cbr-Mir-7587_3p*

mirBase accessionNone
Sequence
40- UAACGUUGAGGAAUUUUAGAAC -62
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