| MirGeneDB ID | Cbr-Mir-7583-P4 |
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| Family name |
MIR-7583 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-7583d
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| Paralogues |
Cbr-Mir-7583-P1
Cbr-Mir-7583-P2
Cbr-Mir-7583-P3
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
X: 20312033-20312090 [+]
Ensembl
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| Seed |
GUUGCAA |
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Precursor
(pre-Mir +30nt flank) |
CUUUAUCUACUUGAUGAACACAACGUCGUCAGUUGCAAAUAUCGUGGUGGCAUUACAUGUUGUCUUGCCAUCCGUCAUUUGUGGUUGACGAUGUAUCAUGUACAUCAGAAGAAGUUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUUAUCUACUUGAUGAACACA--| UU AU U UUACAU
ACGUCGUCAG GCAAAU CG GGUGGCA \
UGUAGCAGUU UGUUUA GC CUACCGU G
UCUUGAAGAAGACUACAUGUACUA^ GG CU - UCUGUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Mature sequence |
Cbr-Mir-7583-P4_5p |
| mirBase accession | MIMAT0029591 |
|---|
| Sequence |
0- AGUUGCAAAUAUCGUGGUGGCA -22
Get sequence
|
|---|
| Star sequence |
Cbr-Mir-7583-P4_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CCAUCCGUCAUUUGUGGUUGA -58
Get sequence
|
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