MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-7583-P1

Family name MIR-7583 (all species)
Seed CAUCCGA
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7583a
Paralogues Cbr-Mir-7583-P2  Cbr-Mir-7583-P3  Cbr-Mir-7583-P4 
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)
X: 16161882-16161939 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUAACGUUAUUUGCAUGGUAAACGUCGUCAGUUGCAAAUAUCGUGGUGGCAUUACAAGUAGUCUUGCCAUCCGAAAUUUGUGAUUGACGAUGUAUCAUGUAGAUUAUUGAAAGAAUU
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Structure
        10            20        30        40        50         
AAUAACGUUAUUUGCAU----|  AA           UG     A   U       UUACAA 
                     GGU  ACGUCGUCAGU  CAAAU UCG GGUGGCA      \
                     CUA  UGUAGCAGUUA  GUUUA AGC CUACCGU      G
UUAAGAAAGUUAUUAGAUGUA^  --           GU     A   -       UCUGAU 
      110       100          90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-7583-P1_5p*

mirBase accessionMIMAT0029584
Sequence
0- AGUUGCAAAUAUCGUGGUGGCA -22
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Mature sequence

Cbr-Mir-7583-P1_3p

mirBase accessionMIMAT0029585
Sequence
37- CCAUCCGAAAUUUGUGAUUGA -58
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