MirGeneDB ID | Cbr-Mir-7583-P3 |
Family name |
MIR-7583 (all species) |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-7583c
|
Paralogues |
Cbr-Mir-7583-P1
Cbr-Mir-7583-P2
Cbr-Mir-7583-P4
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Orthologues |
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Node of Origin (locus) |
C. briggsae
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Node of Origin (family) |
C. briggsae
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Genome context (CB4) |
X: 10872909-10872966 [+]
Ensembl
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Seed |
GCUGCAA |
Precursor (pre-Mir +30nt flank) |
CUUGAUCUGCUUGAUGAACAAAACGUCGUCAGCUGCAAAAGUCGUGGUGGCAUCACAAGUUGUCUUGCCAUCCGACAUUUGUGGUUGACGAUGCGUCAAGUAGAUUAUCGAAAAAUGU
Get precursor sequence
|
Structure | 10 20 30 40 50
CUUGAUCUGCUUGAUGAACAAAA--| UG A U AUCACAA
CGUCGUCAGC CAAA GUCG GGUGGC \
GUAGCAGUUG GUUU CAGC CUACCG G
UGUAAAAAGCUAUUAGAUGAACUGC^ GU A - UUCUGUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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Mature sequence |
Cbr-Mir-7583-P3_5p |
mirBase accession | MIMAT0029593 |
Sequence |
0- AGCUGCAAAAGUCGUGGUGGC -21
Get sequence
|
Co-mature sequence |
Cbr-Mir-7583-P3_3p |
mirBase accession | MIMAT0029594 |
Sequence |
37- CCAUCCGACAUUUGUGGUUGA -58
Get sequence
|