| MirGeneDB ID | Cbr-Mir-7583-P3 |
|---|
| Family name |
MIR-7583 (all species) |
|---|
| Seed |
GCUGCAA |
|---|
| Species |
Roundworm (Caenorhabditis briggsae) |
|---|
| MiRBase ID |
cbr-mir-7583c
|
|---|
| Paralogues |
Cbr-Mir-7583-P1
Cbr-Mir-7583-P2
Cbr-Mir-7583-P4
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
C. briggsae
|
|---|
| Node of Origin (family) |
C. briggsae
|
|---|
Genome context
(CB4) |
X: 10872909-10872966 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUGAUCUGCUUGAUGAACAAAACGUCGUCAGCUGCAAAAGUCGUGGUGGCAUCACAAGUUGUCUUGCCAUCCGACAUUUGUGGUUGACGAUGCGUCAAGUAGAUUAUCGAAAAAUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUGAUCUGCUUGAUGAACAAAA--| UG A U AUCACAA
CGUCGUCAGC CAAA GUCG GGUGGC \
GUAGCAGUUG GUUU CAGC CUACCG G
UGUAAAAAGCUAUUAGAUGAACUGC^ GU A - UUCUGUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| 01 |
02 |
03 |
04 |
05 |
06 |
07 |
08 |
09 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
Cb |
Ea |
Ma |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Cbr-Mir-7583-P3_5p |
| mirBase accession | MIMAT0029593 |
|---|
| Sequence |
0- AGCUGCAAAAGUCGUGGUGGC -21
Get sequence
|
|---|
| Co-mature sequence |
Cbr-Mir-7583-P3_3p |
| mirBase accession | MIMAT0029594 |
|---|
| Sequence |
37- CCAUCCGACAUUUGUGGUUGA -58
Get sequence
|
|---|
