MirGeneDB 3.0

MirGeneDB ID

Cbr-Mir-7583-P3

Family name MIR-7583 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7583c
Paralogues Cbr-Mir-7583-P1  Cbr-Mir-7583-P2  Cbr-Mir-7583-P4 
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)
X: 10872909-10872966 [+] Ensembl
Seed GCUGCAA
Precursor
(pre-Mir +30nt flank)
CUUGAUCUGCUUGAUGAACAAAACGUCGUCAGCUGCAAAAGUCGUGGUGGCAUCACAAGUUGUCUUGCCAUCCGACAUUUGUGGUUGACGAUGCGUCAAGUAGAUUAUCGAAAAAUGU
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Structure
        10        20          30        40        50         
CUUGAUCUGCUUGAUGAACAAAA--|         UG    A    U      AUCACAA 
                         CGUCGUCAGC  CAAA GUCG GGUGGC       \
                         GUAGCAGUUG  GUUU CAGC CUACCG       G
UGUAAAAAGCUAUUAGAUGAACUGC^         GU    A    -      UUCUGUU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Mature sequence

Cbr-Mir-7583-P3_5p

mirBase accessionMIMAT0029593
Sequence
0- AGCUGCAAAAGUCGUGGUGGC -21
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Co-mature sequence

Cbr-Mir-7583-P3_3p

mirBase accessionMIMAT0029594
Sequence
37- CCAUCCGACAUUUGUGGUUGA -58
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