MirGeneDB 3.0

MirGeneDB ID

Cbr-Mir-357-P2

Family name MIR-357 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-357-2
Paralogues Cbr-Mir-357-P1 
Orthologues Cel-Mir-357 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)
III: 7290304-7290369 [-] Ensembl
Seed AAUGCCA
Precursor
(pre-Mir +30nt flank)
AGCUGUACUACAUCAGAAGAGACAGCGAAUCCCGGCAAUCACCGUGCAUUUUCAUCUACCAGAGGCACUAAUGAAAAUGCCAGUCAUUGACGGAAUUCGUUGAAUCUGGAAUUAAAGCAUACCCGU
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Structure
        10          20        30        40        50        60   
AGCUGUACUACAUCAGA--|  GA        C   G    C  CGU        AUCUACCAG 
                   AGA  CAGCGAAU CCG CAAU AC   GCAUUUUC         \
                   UCU  GUUGCUUA GGC GUUA UG   CGUAAAAG         A
UGCCCAUACGAAAUUAAGG^  AA        A   A    C  AC-        UAAUCACGG 
    120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-357-P2_5p*

mirBase accessionNone
Sequence
0- CCCGGCAAUCACCGUGCAUUUUC -23
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Mature sequence

Cbr-Mir-357-P2_3p

mirBase accessionMIMAT0001298
Sequence
44- AAAUGCCAGUCAUUGACGGAAU -66
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