MirGeneDB ID | Cbr-Mir-357-P2 |
Family name |
MIR-357 (all species) |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-357-2
|
Paralogues |
Cbr-Mir-357-P1
|
Orthologues |
Cel-Mir-357
|
Node of Origin (locus) |
Caenorhabditis
|
Node of Origin (family) |
Caenorhabditis
|
Genome context (CB4) |
III: 7290304-7290369 [-]
Ensembl
|
Seed |
AAUGCCA |
Precursor (pre-Mir +30nt flank) |
AGCUGUACUACAUCAGAAGAGACAGCGAAUCCCGGCAAUCACCGUGCAUUUUCAUCUACCAGAGGCACUAAUGAAAAUGCCAGUCAUUGACGGAAUUCGUUGAAUCUGGAAUUAAAGCAUACCCGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGCUGUACUACAUCAGA--| GA C G C CGU AUCUACCAG
AGA CAGCGAAU CCG CAAU AC GCAUUUUC \
UCU GUUGCUUA GGC GUUA UG CGUAAAAG A
UGCCCAUACGAAAUUAAGG^ AA A A C AC- UAAUCACGG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Star sequence |
Cbr-Mir-357-P2_5p* |
mirBase accession | None |
Sequence |
0- CCCGGCAAUCACCGUGCAUUUUC -23
Get sequence
|
Mature sequence |
Cbr-Mir-357-P2_3p |
mirBase accession | MIMAT0001298 |
Sequence |
44- AAAUGCCAGUCAUUGACGGAAU -66
Get sequence
|