MirGeneDB 2.1
MirGeneDB ID

Cbr-Mir-2231

Family name MIR-2231 (all species)
Seed CCCUGAG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-2231
Paralogues
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)		 X: 4430575-4430638 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2231)		 Mir-9-P14 X: 4419753-4419815 [-] Ensembl
Mir-785-P2 X: 4421255-4421318 [+] Ensembl
Mir-73-P2b X: 4426608-4426674 [-] Ensembl
Mir-73-P2a X: 4426739-4426799 [-] Ensembl
Mir-73-P1a X: 4426903-4426964 [-] Ensembl
Mir-2231 X: 4430575-4430638 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCGGCCUCUCGCAUGCUGUGUGAGGCUGAACGGUAUCAACCUCAGGUAGCAGAGACCACAUGACUGCUAGCUCCCUGAGUAGCUGCCGUUGAGACUCGAGAAAGCGUGUUGUUGUCGAUUUC
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Structure
        10         20         30        40        50        60  
CCGCGGCCUCUCGCAUG-  GUG-|   G  G       UCAAC      U   AGAGACCAC 
                  CU    UGAG CU AACGGUA     CUCAGG AGC         \
                  GA    GCUC GA UUGCCGU     GAGUCC UCG         A
CUUUAGCUGUUGUUGUGC  AAGA^   A  G       CGAU-      C   AUCGUCAGU 
  120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-2231_5p*
mirBase accessionNone
Sequence 
0- AACGGUAUCAACCUCAGGUAGC -22
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Mature sequence

Cbr-Mir-2231_3p
mirBase accessionMIMAT0029917
Sequence 
43- UCCCUGAGUAGCUGCCGUUGA -64
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